Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC004223.2-201ENST00000590309 544 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 AC009452.1-201ENST00000640823 606 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.82■□□□□ 0.28
LHX6Q9UPM6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX6Q9UPM6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 AP000344.2-201ENST00000512987 629 ntBASIC16.81■□□□□ 0.28
LHX6Q9UPM6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.81■□□□□ 0.28
LHX6Q9UPM6 AL158211.5-201ENST00000623583 2518 ntBASIC16.81■□□□□ 0.28
LHX6Q9UPM6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 AC005082.1-201ENST00000413042 2259 ntBASIC16.81■□□□□ 0.28
LHX6Q9UPM6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX6Q9UPM6 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.8■□□□□ 0.28
LHX6Q9UPM6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 AL365223.1-201ENST00000574864 1297 ntBASIC16.8■□□□□ 0.28
LHX6Q9UPM6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 AC092723.2-201ENST00000624955 793 ntBASIC16.8■□□□□ 0.28
LHX6Q9UPM6 AP000867.4-201ENST00000641616 219 ntBASIC16.8■□□□□ 0.28
LHX6Q9UPM6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LHX6Q9UPM6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms