Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 UPF3AP3-201ENST00000420996 769 ntBASIC18.1■□□□□ 0.49
EBF1Q9UH73 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 AL356488.2-201ENST00000602755 427 ntBASIC18.1■□□□□ 0.49
EBF1Q9UH73 Z83851.2-201ENST00000609564 659 ntBASIC18.1■□□□□ 0.49
EBF1Q9UH73 AL691403.2-201ENST00000618460 490 ntBASIC18.1■□□□□ 0.49
EBF1Q9UH73 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF1Q9UH73 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF1Q9UH73 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 AC098831.1-202ENST00000438821 336 ntBASIC18.09■□□□□ 0.49
EBF1Q9UH73 KRT18P65-201ENST00000439811 1286 ntBASIC18.09■□□□□ 0.49
EBF1Q9UH73 AC092910.1-201ENST00000482027 1129 ntBASIC18.09■□□□□ 0.49
EBF1Q9UH73 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 AC025062.2-201ENST00000605477 670 ntBASIC18.09■□□□□ 0.49
EBF1Q9UH73 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 AC008735.5-201ENST00000623544 497 ntBASIC18.09■□□□□ 0.49
EBF1Q9UH73 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF1Q9UH73 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
EBF1Q9UH73 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
EBF1Q9UH73 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
EBF1Q9UH73 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.08■□□□□ 0.49
EBF1Q9UH73 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
EBF1Q9UH73 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.08■□□□□ 0.49
EBF1Q9UH73 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC012640.2-201ENST00000561606 901 ntBASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC055717.3-201ENST00000622967 595 ntBASIC18.08■□□□□ 0.48
EBF1Q9UH73 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC139713.2-201ENST00000641328 2723 ntBASIC18.08■□□□□ 0.48
EBF1Q9UH73 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.08■□□□□ 0.48
EBF1Q9UH73 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms