Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 AC073592.4-201ENST00000623827 446 ntBASIC17.59■□□□□ 0.41
NCDNQ9UBB6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCDNQ9UBB6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 AC004408.2-201ENST00000623613 2777 ntBASIC17.58■□□□□ 0.41
NCDNQ9UBB6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.58■□□□□ 0.41
NCDNQ9UBB6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCDNQ9UBB6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 BCAR1-209ENST00000546196 1340 ntBASIC17.58■□□□□ 0.4
NCDNQ9UBB6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 Z92544.3-201ENST00000624747 417 ntBASIC17.58■□□□□ 0.4
NCDNQ9UBB6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCDNQ9UBB6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AC099343.3-201ENST00000605834 2503 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AL024508.2-201ENST00000607749 1894 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AC093214.1-201ENST00000511688 1107 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AC004790.2-201ENST00000623588 572 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 AC004877.2-201ENST00000623941 599 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCDNQ9UBB6 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.57■□□□□ 0.4
NCDNQ9UBB6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 INGX-202ENST00000489074 768 ntBASIC17.56■□□□□ 0.4
NCDNQ9UBB6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCDNQ9UBB6 AC004706.3-202ENST00000621574 984 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms