Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 PHGDH-209ENST00000641074 1780 ntBASIC18.02■□□□□ 0.47
NCKIPSDQ9NZQ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 TSPY19P-201ENST00000418461 509 ntBASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 TSPY18P-201ENST00000441642 509 ntBASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AP000867.3-201ENST00000524675 377 ntBASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AC091304.2-201ENST00000564639 760 ntBASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 RNF126P1-202ENST00000569893 925 ntBASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKIPSDQ9NZQ3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AL845331.1-201ENST00000424978 1190 ntBASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AC005332.3-201ENST00000589904 676 ntBASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 GPR32P1-201ENST00000601788 811 ntBASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AL390719.2-201ENST00000606993 987 ntBASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NCKIPSDQ9NZQ3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 AL163051.1-201ENST00000569214 1512 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 TOB2P1-201ENST00000469761 992 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 VENTXP7-201ENST00000475503 772 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 AC104819.1-201ENST00000504587 486 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 Z69720.1-201ENST00000601483 472 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 IGHV3-41-201ENST00000613121 348 ntBASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 SDHAP2-201ENST00000455183 2001 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms