Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AC091304.2-201ENST00000564639 760 ntBASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AL732292.2-201ENST00000609649 430 ntBASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM248Q9NWD8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM248Q9NWD8 LINC00304-203ENST00000565008 1864 ntBASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 AC019129.2-201ENST00000609837 1235 ntBASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 LINC01451-201ENST00000623792 534 ntBASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM248Q9NWD8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AL133373.2-201ENST00000623187 2828 ntBASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AC002558.1-201ENST00000488906 803 ntBASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 AL049757.1-201ENST00000616842 1596 ntBASIC18.13■□□□□ 0.49
TMEM248Q9NWD8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms