Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 ECEL1P2-202ENST00000465689 757 ntBASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 DUTP2-201ENST00000519164 463 ntBASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 LINC01238-205ENST00000567549 1107 ntBASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCM2LQ9NUG4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 AC106886.4-201ENST00000623557 2502 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 MCCD1P1-208ENST00000445732 328 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 KRT18P56-201ENST00000507275 550 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 PCDHB19P-201ENST00000570871 2371 ntBASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCM2LQ9NUG4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 LINC00304-203ENST00000565008 1864 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 AC022616.7-201ENST00000525383 220 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 KRT126P-201ENST00000549467 1181 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 AC105020.1-201ENST00000435356 2205 ntBASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCM2LQ9NUG4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms