Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 AC068472.1-201ENST00000474589 881 ntBASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 AC007613.1-201ENST00000572811 2597 ntBASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE2Q9NQ36 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
SCUBE2Q9NQ36 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SCUBE2Q9NQ36 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
SCUBE2Q9NQ36 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 MTCL1P1-201ENST00000446207 792 ntBASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 RN7SL606P-201ENST00000472779 293 ntBASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 AC112698.1-201ENST00000510299 916 ntBASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 LTB4R2-202ENST00000528054 3092 ntBASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE2Q9NQ36 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 NUS1P1-201ENST00000446295 882 ntBASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AL160237.2-201ENST00000556165 472 ntBASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AC011840.4-201ENST00000578471 627 ntBASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AP002414.4-201ENST00000589764 1148 ntBASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCUBE2Q9NQ36 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCUBE2Q9NQ36 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCUBE2Q9NQ36 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms