Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 LINC01311-201ENST00000565162 1445 ntBASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 AC104390.1-201ENST00000555663 520 ntBASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 HYMAI.1-201ENST00000620949 238 ntBASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 AC079602.3-201ENST00000623931 403 ntBASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN28AQ9H9Z2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 HOXB1-202ENST00000577092 1414 ntBASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 AC010240.3-201ENST00000607688 395 ntBASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN28AQ9H9Z2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.14■□□□□ 0.34
LIN28AQ9H9Z2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 AC034232.1-201ENST00000506026 1064 ntBASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 MIR3917-201ENST00000580971 93 ntBASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 AC083849.1-201ENST00000615227 514 ntBASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 AL358472.4-201ENST00000633140 710 ntBASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN28AQ9H9Z2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms