Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 AC103564.2-201ENST00000432853 1299 ntBASIC20.96■□□□□ 0.95
RNF41Q9H4P4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF41Q9H4P4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF41Q9H4P4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 KRT126P-201ENST00000549467 1181 ntBASIC20.95■□□□□ 0.94
RNF41Q9H4P4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 AL732292.2-201ENST00000609649 430 ntBASIC20.95■□□□□ 0.94
RNF41Q9H4P4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF41Q9H4P4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AL450487.1-201ENST00000426799 995 ntBASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AC111152.3-201ENST00000569699 673 ntBASIC20.94■□□□□ 0.94
RNF41Q9H4P4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF41Q9H4P4 AC007613.1-201ENST00000572811 2597 ntBASIC20.93■□□□□ 0.94
RNF41Q9H4P4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms