Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 AP004607.4-201ENST00000530158 1459 ntBASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 LINC00552-201ENST00000625151 2579 ntBASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 AC136428.2-201ENST00000563187 214 ntBASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CYSTM1Q9H1C7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms