Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 AC116407.2-201ENST00000613639 860 ntBASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXP3Q9BZS1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXP3Q9BZS1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms