Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 FOSL1P1-201ENST00000511041 816 ntBASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 AC010460.3-201ENST00000511359 1579 ntBASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM62Q9BVG3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TSPY19P-201ENST00000418461 509 ntBASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TSPY18P-201ENST00000441642 509 ntBASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 AC091304.2-201ENST00000564639 760 ntBASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 LINC01451-201ENST00000623792 534 ntBASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 INTS4P1-201ENST00000438455 1935 ntBASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM62Q9BVG3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM62Q9BVG3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRIM62Q9BVG3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM62Q9BVG3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM62Q9BVG3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM62Q9BVG3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 MYCLP1-201ENST00000372451 1075 ntBASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AC002558.1-201ENST00000488906 803 ntBASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 MIR5100-201ENST00000579544 119 ntBASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AL591684.3-201ENST00000605187 298 ntBASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AC008764.6-201ENST00000595909 2069 ntBASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM62Q9BVG3 AC006116.8-202ENST00000587620 1550 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms