Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 AL356309.3-201ENST00000624132 1934 ntBASIC20.65■□□□□ 0.9
SLF1Q9BQI6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 KRT8P47-201ENST00000604727 1398 ntBASIC20.65■□□□□ 0.9
SLF1Q9BQI6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 AC096633.1-201ENST00000422446 749 ntBASIC20.65■□□□□ 0.9
SLF1Q9BQI6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 AC139887.3-201ENST00000568585 713 ntBASIC20.65■□□□□ 0.9
SLF1Q9BQI6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.65■□□□□ 0.9
SLF1Q9BQI6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SLF1Q9BQI6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLF1Q9BQI6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLF1Q9BQI6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLF1Q9BQI6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLF1Q9BQI6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 DUTP2-201ENST00000519164 463 ntBASIC20.64■□□□□ 0.89
SLF1Q9BQI6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLF1Q9BQI6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AL354751.1-201ENST00000412768 1863 ntBASIC20.63■□□□□ 0.89
SLF1Q9BQI6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AC023511.2-201ENST00000618803 211 ntBASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AL139288.1-201ENST00000623748 933 ntBASIC20.63■□□□□ 0.89
SLF1Q9BQI6 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.63■□□□□ 0.89
SLF1Q9BQI6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.63■□□□□ 0.89
SLF1Q9BQI6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.62■□□□□ 0.89
SLF1Q9BQI6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms