Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AL136038.4-201ENST00000603606 1261 ntBASIC16.54■□□□□ 0.24
TM9SF2Q99805 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 SLC25A6P5-201ENST00000435663 894 ntBASIC16.53■□□□□ 0.24
TM9SF2Q99805 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.53■□□□□ 0.24
TM9SF2Q99805 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 SIRPAP1-201ENST00000448467 1770 ntBASIC16.53■□□□□ 0.24
TM9SF2Q99805 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF2Q99805 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF2Q99805 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 AL645608.8-201ENST00000606034 2086 ntBASIC16.52■□□□□ 0.24
TM9SF2Q99805 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF2Q99805 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 HLA-F-220ENST00000434407 884 ntBASIC16.52■□□□□ 0.24
TM9SF2Q99805 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 SPDYE13P-201ENST00000445314 798 ntBASIC16.52■□□□□ 0.24
TM9SF2Q99805 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.52■□□□□ 0.24
TM9SF2Q99805 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TM9SF2Q99805 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF2Q99805 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF2Q99805 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 AL391807.1-203ENST00000604392 2365 ntBASIC16.51■□□□□ 0.23
TM9SF2Q99805 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF2Q99805 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF2Q99805 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF2Q99805 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF2Q99805 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF2Q99805 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms