Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
GFI1Q99684 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.34■□□□□ 0.05
GFI1Q99684 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GFI1Q99684 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
GFI1Q99684 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 AC007663.1-201ENST00000438948 1240 ntBASIC15.34■□□□□ 0.05
GFI1Q99684 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.34■□□□□ 0.05
GFI1Q99684 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.34■□□□□ 0.05
GFI1Q99684 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.34■□□□□ 0.05
GFI1Q99684 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.34■□□□□ 0.05
GFI1Q99684 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFI1Q99684 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFI1Q99684 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
GFI1Q99684 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
GFI1Q99684 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFI1Q99684 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFI1Q99684 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GFI1Q99684 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GFI1Q99684 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GFI1Q99684 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 RPS2P55-201ENST00000397318 883 ntBASIC15.33■□□□□ 0.04
GFI1Q99684 AC107956.1-201ENST00000494359 873 ntBASIC15.33■□□□□ 0.04
GFI1Q99684 BX088651.1-201ENST00000540551 451 ntBASIC15.33■□□□□ 0.04
GFI1Q99684 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GFI1Q99684 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
GFI1Q99684 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.33■□□□□ 0.04
GFI1Q99684 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.33■□□□□ 0.04
GFI1Q99684 AC024243.1-201ENST00000609234 778 ntBASIC15.33■□□□□ 0.04
GFI1Q99684 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
GFI1Q99684 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.33■□□□□ 0.04
GFI1Q99684 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GFI1Q99684 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 AC008894.3-201ENST00000624324 3103 ntBASIC15.33■□□□□ 0.04
GFI1Q99684 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.33■□□□□ 0.04
GFI1Q99684 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.33■□□□□ 0.04
GFI1Q99684 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.33■□□□□ 0.04
GFI1Q99684 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFI1Q99684 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GFI1Q99684 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFI1Q99684 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GFI1Q99684 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GFI1Q99684 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms