Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AL049757.1-201ENST00000616842 1596 ntBASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN4Q96NY8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 FAM58CP-201ENST00000435741 640 ntBASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AC239800.4-201ENST00000603712 296 ntBASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AC004835.2-201ENST00000603762 682 ntBASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AL096865.1-201ENST00000606796 927 ntBASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 AC007064.4-201ENST00000637740 555 ntBASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.33■□□□□ 0.52
NECTIN4Q96NY8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AC148477.5-201ENST00000625164 1645 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 RHOQP3-201ENST00000437982 621 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 DDX43P3-201ENST00000441064 443 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AC074386.1-202ENST00000463561 864 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 DUTP2-201ENST00000519164 463 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN4Q96NY8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 AP002414.1-201ENST00000391405 1147 ntBASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 COX20P2-201ENST00000452636 358 ntBASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 AC004449.1-201ENST00000564240 433 ntBASIC18.31■□□□□ 0.52
NECTIN4Q96NY8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms