Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 KRT18P27-201ENST00000427733 1299 ntBASIC18.77■□□□□ 0.6
SUSD3Q96L08 AC002558.1-201ENST00000488906 803 ntBASIC18.77■□□□□ 0.6
SUSD3Q96L08 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 STK25P1-201ENST00000585406 838 ntBASIC18.77■□□□□ 0.6
SUSD3Q96L08 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.77■□□□□ 0.6
SUSD3Q96L08 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.77■□□□□ 0.6
SUSD3Q96L08 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SUSD3Q96L08 AC148477.5-201ENST00000625164 1645 ntBASIC18.77■□□□□ 0.6
SUSD3Q96L08 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SUSD3Q96L08 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SUSD3Q96L08 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SUSD3Q96L08 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SUSD3Q96L08 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SUSD3Q96L08 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 IGHV3-52-201ENST00000519770 353 ntBASIC18.76■□□□□ 0.59
SUSD3Q96L08 KRT18P58-201ENST00000527480 1120 ntBASIC18.76■□□□□ 0.59
SUSD3Q96L08 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 AL589182.2-201ENST00000619332 1049 ntBASIC18.76■□□□□ 0.59
SUSD3Q96L08 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 ZNF259P1-201ENST00000407656 1365 ntBASIC18.76■□□□□ 0.59
SUSD3Q96L08 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 AP002414.3-201ENST00000589352 1468 ntBASIC18.76■□□□□ 0.59
SUSD3Q96L08 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.76■□□□□ 0.59
SUSD3Q96L08 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SUSD3Q96L08 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 SIGLEC30P-201ENST00000455569 941 ntBASIC18.75■□□□□ 0.59
SUSD3Q96L08 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 AC006557.2-201ENST00000592985 1240 ntBASIC18.75■□□□□ 0.59
SUSD3Q96L08 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.75■□□□□ 0.59
SUSD3Q96L08 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SUSD3Q96L08 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SUSD3Q96L08 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SUSD3Q96L08 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SUSD3Q96L08 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SUSD3Q96L08 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SUSD3Q96L08 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SUSD3Q96L08 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SUSD3Q96L08 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.74■□□□□ 0.59
SUSD3Q96L08 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.74■□□□□ 0.59
SUSD3Q96L08 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.74■□□□□ 0.59
SUSD3Q96L08 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms