Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 MIR149-201ENST00000384879 89 ntBASIC16.06■□□□□ 0.16
LRRC46Q96FV0 IGHV3-47-201ENST00000425060 335 ntBASIC16.06■□□□□ 0.16
LRRC46Q96FV0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 RN7SL606P-201ENST00000472779 293 ntBASIC16.06■□□□□ 0.16
LRRC46Q96FV0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC46Q96FV0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 KRT8P50-201ENST00000562022 1438 ntBASIC16.05■□□□□ 0.16
LRRC46Q96FV0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC46Q96FV0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 AC093909.1-201ENST00000504731 1122 ntBASIC16.04■□□□□ 0.16
LRRC46Q96FV0 AC113404.2-201ENST00000507884 177 ntBASIC16.04■□□□□ 0.16
LRRC46Q96FV0 AC079776.4-201ENST00000511039 504 ntBASIC16.04■□□□□ 0.16
LRRC46Q96FV0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRC46Q96FV0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms