Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 ANO7L1-203ENST00000602586 1720 ntBASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 PRSS29P-201ENST00000440800 595 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 CEND1P1-201ENST00000451006 455 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 IGHV3-65-201ENST00000523210 341 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 AC008667.4-201ENST00000607370 168 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 AC004790.2-201ENST00000623588 572 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 ELL2P1-201ENST00000413990 1906 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 NCF1C-201ENST00000438382 1427 ntBASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNRNP40Q96DI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 GPR89P-201ENST00000407924 1495 ntBASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 AL353593.2-201ENST00000602529 1483 ntBASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 RPS15P9-201ENST00000494093 319 ntBASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRNP40Q96DI7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 AC148477.5-201ENST00000625164 1645 ntBASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 AC132938.5-201ENST00000624980 1813 ntBASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SNRNP40Q96DI7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms