Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 GK-202ENST00000378941 458 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 ADH5P3-201ENST00000433842 1137 ntBASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 INGX-202ENST00000489074 768 ntBASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 MIR661-201ENST00000384842 89 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC236430.1-201ENST00000402231 743 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AL627223.1-201ENST00000416693 442 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 LINC00982-205ENST00000420957 435 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC109462.3-201ENST00000573934 613 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC012645.4-201ENST00000610691 1061 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AC009093.7-201ENST00000623853 1223 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM43Q96BQ3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AC093010.1-201ENST00000473625 1624 ntBASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 STK19B-204ENST00000512515 211 ntBASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 STK25P1-201ENST00000585406 838 ntBASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM43Q96BQ3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms