Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 SPDYE22P-201ENST00000582158 798 ntBASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AL132655.2-201ENST00000596276 594 ntBASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 GMCL1P1-201ENST00000463439 1581 ntBASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AL161938.1-201ENST00000569833 2180 ntBASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ALMS1Q8TCU4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 AC008677.1-201ENST00000519230 1561 ntBASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 AC109462.3-201ENST00000573934 613 ntBASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ALMS1Q8TCU4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 GNAS-203ENST00000306120 1878 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 MIR1909-201ENST00000411312 80 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AL592309.1-201ENST00000443127 649 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC097637.2-201ENST00000624096 1997 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 SLC25A39P2-201ENST00000537614 270 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 DDX43P3-201ENST00000441064 443 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms