Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 MIR1199-201ENST00000621445 119 ntBASIC21.81■■□□□ 1.08
RTL9Q8NET4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 NCF1C-201ENST00000438382 1427 ntBASIC21.8■■□□□ 1.08
RTL9Q8NET4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 KRT18P55-202ENST00000578578 1546 ntBASIC21.8■■□□□ 1.08
RTL9Q8NET4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 AC109462.3-201ENST00000573934 613 ntBASIC21.8■■□□□ 1.08
RTL9Q8NET4 AP001160.2-201ENST00000596071 487 ntBASIC21.8■■□□□ 1.08
RTL9Q8NET4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.8■■□□□ 1.08
RTL9Q8NET4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTL9Q8NET4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 FLJ13224-201ENST00000313737 1514 ntBASIC21.79■■□□□ 1.08
RTL9Q8NET4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 AL139424.1-201ENST00000607572 797 ntBASIC21.79■■□□□ 1.08
RTL9Q8NET4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTL9Q8NET4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL9Q8NET4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 AC112482.1-201ENST00000492080 688 ntBASIC21.78■■□□□ 1.08
RTL9Q8NET4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTL9Q8NET4 AC090164.3-201ENST00000610780 2143 ntBASIC21.78■■□□□ 1.08
RTL9Q8NET4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.78■■□□□ 1.08
RTL9Q8NET4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTL9Q8NET4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms