Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.9□□□□□ -0.18
C3orf56Q8N813 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
C3orf56Q8N813 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
C3orf56Q8N813 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C3orf56Q8N813 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C3orf56Q8N813 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C3orf56Q8N813 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C3orf56Q8N813 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.9□□□□□ -0.18
C3orf56Q8N813 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C3orf56Q8N813 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C3orf56Q8N813 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.9□□□□□ -0.19
C3orf56Q8N813 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.19
C3orf56Q8N813 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.9□□□□□ -0.19
C3orf56Q8N813 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 VN2R19P-201ENST00000442399 1052 ntBASIC13.89□□□□□ -0.19
C3orf56Q8N813 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 AC112698.1-201ENST00000510299 916 ntBASIC13.89□□□□□ -0.19
C3orf56Q8N813 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
C3orf56Q8N813 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C3orf56Q8N813 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 AC025678.2-201ENST00000562061 970 ntBASIC13.88□□□□□ -0.19
C3orf56Q8N813 AC138761.1-201ENST00000584393 385 ntBASIC13.88□□□□□ -0.19
C3orf56Q8N813 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 AL589182.2-201ENST00000619332 1049 ntBASIC13.88□□□□□ -0.19
C3orf56Q8N813 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.88□□□□□ -0.19
C3orf56Q8N813 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C3orf56Q8N813 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms