Protein–RNA interactions for Protein: Q8IV13

CCNJL, Cyclin-J-like protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJLQ8IV13 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNJLQ8IV13 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNJLQ8IV13 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNJLQ8IV13 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 HCG4P8-203ENST00000443049 980 ntBASIC18.24■□□□□ 0.51
CCNJLQ8IV13 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 AC011270.2-201ENST00000624293 2550 ntBASIC18.24■□□□□ 0.51
CCNJLQ8IV13 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNJLQ8IV13 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.23■□□□□ 0.51
CCNJLQ8IV13 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 MIR3917-201ENST00000580971 93 ntBASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNJLQ8IV13 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 AC132938.6-201ENST00000623828 1655 ntBASIC18.22■□□□□ 0.51
CCNJLQ8IV13 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 KRT18P48-201ENST00000434763 852 ntBASIC18.22■□□□□ 0.51
CCNJLQ8IV13 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNJLQ8IV13 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms