Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AC096734.2-201ENST00000562054 433 ntBASIC18.14■□□□□ 0.49
DENND4AQ7Z401 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 AL590787.1-201ENST00000568856 1315 ntBASIC18.14■□□□□ 0.49
DENND4AQ7Z401 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.14■□□□□ 0.49
DENND4AQ7Z401 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 AC093503.3-201ENST00000624917 2352 ntBASIC18.13■□□□□ 0.49
DENND4AQ7Z401 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 HLA-J-203ENST00000494367 1087 ntBASIC18.13■□□□□ 0.49
DENND4AQ7Z401 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 STK25P1-201ENST00000585406 838 ntBASIC18.13■□□□□ 0.49
DENND4AQ7Z401 AC023141.13-201ENST00000604991 943 ntBASIC18.13■□□□□ 0.49
DENND4AQ7Z401 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DENND4AQ7Z401 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 TNXA-203ENST00000507684 2038 ntBASIC18.12■□□□□ 0.49
DENND4AQ7Z401 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 AC099522.2-201ENST00000607001 744 ntBASIC18.12■□□□□ 0.49
DENND4AQ7Z401 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 AC006116.8-202ENST00000587620 1550 ntBASIC18.12■□□□□ 0.49
DENND4AQ7Z401 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.12■□□□□ 0.49
DENND4AQ7Z401 DUTP2-201ENST00000519164 463 ntBASIC18.12■□□□□ 0.49
DENND4AQ7Z401 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.12■□□□□ 0.49
DENND4AQ7Z401 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 AC087163.2-201ENST00000457299 853 ntBASIC18.11■□□□□ 0.49
DENND4AQ7Z401 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 AC239800.4-201ENST00000603712 296 ntBASIC18.11■□□□□ 0.49
DENND4AQ7Z401 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DENND4AQ7Z401 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND4AQ7Z401 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND4AQ7Z401 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND4AQ7Z401 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms