Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF20Q5VTR2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF20Q5VTR2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF20Q5VTR2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF20Q5VTR2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF20Q5VTR2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 FAM210CP-201ENST00000445714 574 ntBASIC21.25■□□□□ 0.99
RNF20Q5VTR2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 PKD1P1-201ENST00000458669 6805 ntBASIC21.25■□□□□ 0.99
RNF20Q5VTR2 GUSBP12-201ENST00000513727 720 ntBASIC21.25■□□□□ 0.99
RNF20Q5VTR2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 LINC01451-201ENST00000623792 534 ntBASIC21.25■□□□□ 0.99
RNF20Q5VTR2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF20Q5VTR2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 TSPY22P-201ENST00000427496 604 ntBASIC21.24■□□□□ 0.99
RNF20Q5VTR2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 AL121956.5-201ENST00000625261 221 ntBASIC21.24■□□□□ 0.99
RNF20Q5VTR2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 LINC00304-203ENST00000565008 1864 ntBASIC21.24■□□□□ 0.99
RNF20Q5VTR2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF20Q5VTR2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 AC011498.5-201ENST00000592027 486 ntBASIC21.23■□□□□ 0.99
RNF20Q5VTR2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF20Q5VTR2 BX276092.7-203ENST00000637198 1536 ntBASIC21.23■□□□□ 0.99
RNF20Q5VTR2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 HLA-J-201ENST00000462773 1622 ntBASIC21.22■□□□□ 0.99
RNF20Q5VTR2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 AL031133.1-201ENST00000406807 723 ntBASIC21.22■□□□□ 0.99
RNF20Q5VTR2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms