Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 AC006116.8-202ENST00000587620 1550 ntBASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 AC004461.1-201ENST00000412461 403 ntBASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 AC023141.5-201ENST00000458585 616 ntBASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPAQ5VT25 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.64■■□□□ 1.86
CDC42BPAQ5VT25 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 METTL23-205ENST00000588302 925 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 AC009093.7-201ENST00000623853 1223 ntBASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPAQ5VT25 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AC025580.3-201ENST00000617932 1424 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AL035633.1-201ENST00000406139 838 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AC109322.1-201ENST00000524499 1264 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AC011467.4-201ENST00000594891 528 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AC023141.13-201ENST00000604991 943 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AC093512.1-201ENST00000617969 520 ntBASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPAQ5VT25 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 ACTL9-202ENST00000612068 1252 ntBASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 AC116407.2-201ENST00000613639 860 ntBASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 REXO1L11P-201ENST00000620964 1927 ntBASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 CXCL1P1-201ENST00000502804 216 ntBASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42BPAQ5VT25 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms