Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 AC063952.2-201ENST00000498792 1227 ntBASIC17■□□□□ 0.31
SPIN4Q56A73 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17■□□□□ 0.31
SPIN4Q56A73 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 VENTXP5-201ENST00000523979 775 ntBASIC17■□□□□ 0.31
SPIN4Q56A73 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17■□□□□ 0.31
SPIN4Q56A73 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17■□□□□ 0.31
SPIN4Q56A73 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17■□□□□ 0.31
SPIN4Q56A73 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 BX276092.7-203ENST00000637198 1536 ntBASIC17■□□□□ 0.31
SPIN4Q56A73 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17■□□□□ 0.31
SPIN4Q56A73 SIRPAP1-201ENST00000448467 1770 ntBASIC17■□□□□ 0.31
SPIN4Q56A73 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPIN4Q56A73 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 MTCL1P1-201ENST00000446207 792 ntBASIC16.99■□□□□ 0.31
SPIN4Q56A73 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 AC005332.3-201ENST00000589904 676 ntBASIC16.99■□□□□ 0.31
SPIN4Q56A73 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 AL390719.2-201ENST00000606993 987 ntBASIC16.99■□□□□ 0.31
SPIN4Q56A73 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 REXO1L11P-201ENST00000620964 1927 ntBASIC16.99■□□□□ 0.31
SPIN4Q56A73 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 AL023806.1-201ENST00000603994 1649 ntBASIC16.99■□□□□ 0.31
SPIN4Q56A73 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPIN4Q56A73 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.99■□□□□ 0.31
SPIN4Q56A73 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 AC139713.2-201ENST00000641328 2723 ntBASIC16.98■□□□□ 0.31
SPIN4Q56A73 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 AC022616.7-201ENST00000525383 220 ntBASIC16.98■□□□□ 0.31
SPIN4Q56A73 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 PP12613-201ENST00000424958 2230 ntBASIC16.98■□□□□ 0.31
SPIN4Q56A73 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.31
SPIN4Q56A73 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPIN4Q56A73 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SPIN4Q56A73 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPIN4Q56A73 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.97■□□□□ 0.31
SPIN4Q56A73 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPIN4Q56A73 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPIN4Q56A73 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.97■□□□□ 0.31
SPIN4Q56A73 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.97■□□□□ 0.31
SPIN4Q56A73 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPIN4Q56A73 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPIN4Q56A73 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms