Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PP12613-201ENST00000424958 2230 ntBASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN20Q4JDL3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PTPN20Q4JDL3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 ATP5G2P1-201ENST00000433580 426 ntBASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 AC007967.3-201ENST00000434308 558 ntBASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 HLA-J-201ENST00000462773 1622 ntBASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN20Q4JDL3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 AC092119.3-201ENST00000612618 583 ntBASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN20Q4JDL3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 AC093458.2-201ENST00000623150 629 ntBASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms