Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 IGHV3-47-201ENST00000425060 335 ntBASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 AC009533.2-201ENST00000543664 586 ntBASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 AC133963.1-201ENST00000504166 1679 ntBASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
PRICKLE4Q2TBC4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE4Q2TBC4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AC005104.2-201ENST00000427818 678 ntBASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AP000867.3-201ENST00000524675 377 ntBASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AC074051.2-201ENST00000565115 352 ntBASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AC012615.1-201ENST00000565797 1299 ntBASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE4Q2TBC4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms