Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH17Q12864 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 AL138688.1-201ENST00000624851 1594 ntBASIC17.99■□□□□ 0.47
CDH17Q12864 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH17Q12864 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH17Q12864 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH17Q12864 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 REXO1L11P-201ENST00000620964 1927 ntBASIC17.98■□□□□ 0.47
CDH17Q12864 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 PP12613-201ENST00000424958 2230 ntBASIC17.98■□□□□ 0.47
CDH17Q12864 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CDH17Q12864 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH17Q12864 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH17Q12864 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH17Q12864 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH17Q12864 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH17Q12864 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH17Q12864 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH17Q12864 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.98■□□□□ 0.47
CDH17Q12864 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH17Q12864 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CDH17Q12864 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH17Q12864 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH17Q12864 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH17Q12864 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.97■□□□□ 0.47
CDH17Q12864 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH17Q12864 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CDH17Q12864 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH17Q12864 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH17Q12864 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH17Q12864 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH17Q12864 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 BX276092.7-203ENST00000637198 1536 ntBASIC17.97■□□□□ 0.47
CDH17Q12864 AC139713.2-201ENST00000641328 2723 ntBASIC17.97■□□□□ 0.47
CDH17Q12864 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH17Q12864 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH17Q12864 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CDH17Q12864 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH17Q12864 LTB4R2-202ENST00000528054 3092 ntBASIC17.96■□□□□ 0.47
CDH17Q12864 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH17Q12864 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH17Q12864 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH17Q12864 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH17Q12864 AL645929.1-201ENST00000420084 975 ntBASIC17.96■□□□□ 0.47
CDH17Q12864 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.96■□□□□ 0.47
CDH17Q12864 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH17Q12864 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms