Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA1Q09470 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA1Q09470 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA1Q09470 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNA1Q09470 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA1Q09470 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
KCNA1Q09470 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
KCNA1Q09470 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
KCNA1Q09470 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.54■□□□□ 0.72
KCNA1Q09470 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
KCNA1Q09470 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
KCNA1Q09470 IGHV3-47-201ENST00000425060 335 ntBASIC19.53■□□□□ 0.72
KCNA1Q09470 AP000867.3-201ENST00000524675 377 ntBASIC19.53■□□□□ 0.72
KCNA1Q09470 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.53■□□□□ 0.72
KCNA1Q09470 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
KCNA1Q09470 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KCNA1Q09470 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.53■□□□□ 0.72
KCNA1Q09470 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA1Q09470 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNA1Q09470 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 PP12613-201ENST00000424958 2230 ntBASIC19.52■□□□□ 0.72
KCNA1Q09470 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
KCNA1Q09470 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
KCNA1Q09470 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
KCNA1Q09470 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 AC007967.3-201ENST00000434308 558 ntBASIC19.52■□□□□ 0.72
KCNA1Q09470 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.52■□□□□ 0.72
KCNA1Q09470 KRT17P6-201ENST00000453795 1220 ntBASIC19.52■□□□□ 0.72
KCNA1Q09470 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.52■□□□□ 0.72
KCNA1Q09470 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.52■□□□□ 0.72
KCNA1Q09470 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.52■□□□□ 0.72
KCNA1Q09470 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.52■□□□□ 0.72
KCNA1Q09470 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.52■□□□□ 0.72
KCNA1Q09470 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.52■□□□□ 0.72
KCNA1Q09470 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
KCNA1Q09470 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.52■□□□□ 0.72
KCNA1Q09470 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.52■□□□□ 0.72
KCNA1Q09470 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNA1Q09470 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
KCNA1Q09470 HCG11-201ENST00000411553 5696 ntBASIC19.52■□□□□ 0.71
KCNA1Q09470 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KCNA1Q09470 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KCNA1Q09470 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
KCNA1Q09470 AC097374.2-201ENST00000618617 1306 ntBASIC19.51■□□□□ 0.71
KCNA1Q09470 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
KCNA1Q09470 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.51■□□□□ 0.71
KCNA1Q09470 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
KCNA1Q09470 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
KCNA1Q09470 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KCNA1Q09470 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.51■□□□□ 0.71
KCNA1Q09470 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.51■□□□□ 0.71
KCNA1Q09470 DDX43P3-201ENST00000441064 443 ntBASIC19.51■□□□□ 0.71
KCNA1Q09470 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.51■□□□□ 0.71
KCNA1Q09470 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.51■□□□□ 0.71
KCNA1Q09470 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
KCNA1Q09470 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KCNA1Q09470 NSUN5P1-202ENST00000421140 1535 ntBASIC19.51■□□□□ 0.71
KCNA1Q09470 NSUN5P2-203ENST00000457352 1529 ntBASIC19.51■□□□□ 0.71
KCNA1Q09470 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.51■□□□□ 0.71
KCNA1Q09470 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.51■□□□□ 0.71
KCNA1Q09470 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.51■□□□□ 0.71
KCNA1Q09470 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA1Q09470 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA1Q09470 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms