Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
CDR2Q01850 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.98■□□□□ 0.63
CDR2Q01850 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.98■□□□□ 0.63
CDR2Q01850 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 LINC01451-201ENST00000623792 534 ntBASIC18.98■□□□□ 0.63
CDR2Q01850 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.98■□□□□ 0.63
CDR2Q01850 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDR2Q01850 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.98■□□□□ 0.63
CDR2Q01850 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.98■□□□□ 0.63
CDR2Q01850 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
CDR2Q01850 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDR2Q01850 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
CDR2Q01850 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDR2Q01850 HLA-J-201ENST00000462773 1622 ntBASIC18.97■□□□□ 0.63
CDR2Q01850 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.97■□□□□ 0.63
CDR2Q01850 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.97■□□□□ 0.63
CDR2Q01850 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.97■□□□□ 0.63
CDR2Q01850 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.97■□□□□ 0.63
CDR2Q01850 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
CDR2Q01850 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDR2Q01850 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
CDR2Q01850 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
CDR2Q01850 AC139713.2-201ENST00000641328 2723 ntBASIC18.96■□□□□ 0.63
CDR2Q01850 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
CDR2Q01850 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CDR2Q01850 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.96■□□□□ 0.63
CDR2Q01850 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.96■□□□□ 0.63
CDR2Q01850 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.96■□□□□ 0.63
CDR2Q01850 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.96■□□□□ 0.63
CDR2Q01850 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDR2Q01850 AL645608.8-201ENST00000606034 2086 ntBASIC18.96■□□□□ 0.63
CDR2Q01850 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CDR2Q01850 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 HTR7P1-202ENST00000624664 4411 ntBASIC18.95■□□□□ 0.62
CDR2Q01850 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDR2Q01850 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 AL138688.1-201ENST00000624851 1594 ntBASIC18.95■□□□□ 0.62
CDR2Q01850 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 AL645929.1-201ENST00000420084 975 ntBASIC18.95■□□□□ 0.62
CDR2Q01850 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDR2Q01850 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.95■□□□□ 0.62
CDR2Q01850 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms