Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S1P61966 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
AP1S1P61966 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S1P61966 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
AP1S1P61966 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 AC103564.2-201ENST00000432853 1299 ntBASIC17.9■□□□□ 0.46
AP1S1P61966 LINC01711-201ENST00000598340 967 ntBASIC17.9■□□□□ 0.46
AP1S1P61966 AL591684.3-201ENST00000605187 298 ntBASIC17.9■□□□□ 0.46
AP1S1P61966 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S1P61966 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
AP1S1P61966 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
AP1S1P61966 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
AP1S1P61966 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S1P61966 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
AP1S1P61966 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP1S1P61966 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.89■□□□□ 0.46
AP1S1P61966 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
AP1S1P61966 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 HTR7P1-202ENST00000624664 4411 ntBASIC17.89■□□□□ 0.45
AP1S1P61966 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.89■□□□□ 0.45
AP1S1P61966 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
AP1S1P61966 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
AP1S1P61966 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.89■□□□□ 0.45
AP1S1P61966 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
AP1S1P61966 AC090340.1-201ENST00000620778 4980 ntBASIC17.89■□□□□ 0.45
AP1S1P61966 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.89■□□□□ 0.45
AP1S1P61966 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
AP1S1P61966 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
AP1S1P61966 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S1P61966 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S1P61966 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S1P61966 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S1P61966 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S1P61966 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.88■□□□□ 0.45
AP1S1P61966 AC111152.3-201ENST00000569699 673 ntBASIC17.88■□□□□ 0.45
AP1S1P61966 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 AL732292.2-201ENST00000609649 430 ntBASIC17.88■□□□□ 0.45
AP1S1P61966 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.88■□□□□ 0.45
AP1S1P61966 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP1S1P61966 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S1P61966 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP1S1P61966 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.87■□□□□ 0.45
AP1S1P61966 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.87■□□□□ 0.45
AP1S1P61966 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms