Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 ARMC10P1-201ENST00000313754 855 ntBASIC16.72■□□□□ 0.27
RPS3AP61247 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 GCSHP2-201ENST00000560971 527 ntBASIC16.72■□□□□ 0.27
RPS3AP61247 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS3AP61247 AC087388.1-201ENST00000571370 1112 ntBASIC16.72■□□□□ 0.27
RPS3AP61247 NTF6B-201ENST00000591913 560 ntBASIC16.72■□□□□ 0.27
RPS3AP61247 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 AC024243.1-201ENST00000609234 778 ntBASIC16.72■□□□□ 0.27
RPS3AP61247 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RPS3AP61247 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS3AP61247 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.72■□□□□ 0.27
RPS3AP61247 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS3AP61247 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 AC022211.2-201ENST00000585075 2527 ntBASIC16.71■□□□□ 0.27
RPS3AP61247 HOXB1-202ENST00000577092 1414 ntBASIC16.71■□□□□ 0.27
RPS3AP61247 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS3AP61247 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RPS3AP61247 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RPS3AP61247 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS3AP61247 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.71■□□□□ 0.27
RPS3AP61247 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.71■□□□□ 0.27
RPS3AP61247 KRT18P35-201ENST00000510488 1269 ntBASIC16.71■□□□□ 0.27
RPS3AP61247 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.71■□□□□ 0.27
RPS3AP61247 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RPS3AP61247 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.71■□□□□ 0.27
RPS3AP61247 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS3AP61247 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RPS3AP61247 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS3AP61247 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RPS3AP61247 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPS3AP61247 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
RPS3AP61247 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS3AP61247 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPS3AP61247 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPS3AP61247 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS3AP61247 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS3AP61247 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS3AP61247 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 STARP1-201ENST00000397973 869 ntBASIC16.7■□□□□ 0.26
RPS3AP61247 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.7■□□□□ 0.26
RPS3AP61247 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS3AP61247 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms