Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42P60953 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 RARRES2P10-201ENST00000564312 460 ntBASIC16.29■□□□□ 0.2
CDC42P60953 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42P60953 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 LINC01451-201ENST00000623792 534 ntBASIC16.29■□□□□ 0.2
CDC42P60953 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC42P60953 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42P60953 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42P60953 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDC42P60953 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 AC132938.6-201ENST00000623828 1655 ntBASIC16.28■□□□□ 0.2
CDC42P60953 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
CDC42P60953 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 MIR4674-201ENST00000582457 87 ntBASIC16.28■□□□□ 0.2
CDC42P60953 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC42P60953 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC42P60953 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42P60953 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42P60953 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC42P60953 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42P60953 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC42P60953 PKD1P5-201ENST00000532415 10291 ntBASIC16.27■□□□□ 0.2
CDC42P60953 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC42P60953 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDC42P60953 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42P60953 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC42P60953 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
CDC42P60953 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC42P60953 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDC42P60953 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42P60953 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42P60953 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC42P60953 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42P60953 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42P60953 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDC42P60953 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDC42P60953 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC42P60953 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42P60953 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDC42P60953 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms