Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN2P57739 AC098831.1-202ENST00000438821 336 ntBASIC17.52■□□□□ 0.4
CLDN2P57739 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 IGHV3-22-201ENST00000520721 359 ntBASIC17.52■□□□□ 0.4
CLDN2P57739 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN2P57739 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN2P57739 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.52■□□□□ 0.4
CLDN2P57739 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN2P57739 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN2P57739 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN2P57739 AC104109.2-201ENST00000602919 1418 ntBASIC17.52■□□□□ 0.4
CLDN2P57739 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN2P57739 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CLDN2P57739 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN2P57739 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN2P57739 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN2P57739 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN2P57739 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLDN2P57739 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN2P57739 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.52■□□□□ 0.39
CLDN2P57739 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 AP002414.3-201ENST00000589352 1468 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLDN2P57739 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CLDN2P57739 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN2P57739 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN2P57739 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN2P57739 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 AC008735.5-201ENST00000623544 497 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 AC073592.5-201ENST00000624854 528 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 AC107918.4-202ENST00000641623 219 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 AP000997.3-201ENST00000623333 2250 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 ZNF259P1-201ENST00000407656 1365 ntBASIC17.51■□□□□ 0.39
CLDN2P57739 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN2P57739 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN2P57739 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN2P57739 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN2P57739 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN2P57739 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN2P57739 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN2P57739 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN2P57739 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms