Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
WNT3P56703 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
WNT3P56703 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
WNT3P56703 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
WNT3P56703 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 STARP1-201ENST00000397973 869 ntBASIC16.83■□□□□ 0.28
WNT3P56703 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT3P56703 KRT18P48-201ENST00000434763 852 ntBASIC16.83■□□□□ 0.28
WNT3P56703 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.83■□□□□ 0.28
WNT3P56703 HOMER2P1-201ENST00000455653 964 ntBASIC16.83■□□□□ 0.28
WNT3P56703 AC092597.1-201ENST00000487352 616 ntBASIC16.83■□□□□ 0.28
WNT3P56703 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.83■□□□□ 0.28
WNT3P56703 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT3P56703 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
WNT3P56703 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.83■□□□□ 0.28
WNT3P56703 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
WNT3P56703 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.83■□□□□ 0.28
WNT3P56703 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 AC009154.2-201ENST00000621177 724 ntBASIC16.83■□□□□ 0.28
WNT3P56703 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
WNT3P56703 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
WNT3P56703 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT3P56703 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 AC112698.1-201ENST00000510299 916 ntBASIC16.82■□□□□ 0.28
WNT3P56703 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT3P56703 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT3P56703 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.82■□□□□ 0.28
WNT3P56703 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
WNT3P56703 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
WNT3P56703 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.81■□□□□ 0.28
WNT3P56703 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT3P56703 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
WNT3P56703 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
WNT3P56703 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
WNT3P56703 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
WNT3P56703 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.81■□□□□ 0.28
WNT3P56703 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 AC112907.2-201ENST00000448639 330 ntBASIC16.81■□□□□ 0.28
WNT3P56703 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 FAM86EP-206ENST00000510506 987 ntBASIC16.81■□□□□ 0.28
WNT3P56703 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.81■□□□□ 0.28
WNT3P56703 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT3P56703 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.81■□□□□ 0.28
WNT3P56703 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.81■□□□□ 0.28
WNT3P56703 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
WNT3P56703 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
WNT3P56703 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
WNT3P56703 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WNT3P56703 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
WNT3P56703 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms