Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AC116407.2-201ENST00000613639 860 ntBASIC14.29□□□□□ -0.12
PAX9P55771 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PAX9P55771 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.29□□□□□ -0.12
PAX9P55771 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.29□□□□□ -0.12
PAX9P55771 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
PAX9P55771 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.28□□□□□ -0.12
PAX9P55771 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.28□□□□□ -0.12
PAX9P55771 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.28□□□□□ -0.12
PAX9P55771 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 AC112497.1-201ENST00000624824 639 ntBASIC14.28□□□□□ -0.12
PAX9P55771 AC005915.1-201ENST00000624912 2018 ntBASIC14.28□□□□□ -0.12
PAX9P55771 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PAX9P55771 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PAX9P55771 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.27□□□□□ -0.12
PAX9P55771 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.27□□□□□ -0.12
PAX9P55771 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.27□□□□□ -0.12
PAX9P55771 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.27□□□□□ -0.12
PAX9P55771 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PAX9P55771 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.27□□□□□ -0.12
PAX9P55771 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PAX9P55771 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.27□□□□□ -0.13
PAX9P55771 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.27□□□□□ -0.13
PAX9P55771 FAM201B-201ENST00000458407 597 ntBASIC14.27□□□□□ -0.13
PAX9P55771 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.27□□□□□ -0.13
PAX9P55771 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.27□□□□□ -0.13
PAX9P55771 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.27□□□□□ -0.13
PAX9P55771 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.27□□□□□ -0.13
PAX9P55771 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 AL603756.1-201ENST00000606511 2163 ntBASIC14.27□□□□□ -0.13
PAX9P55771 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.27□□□□□ -0.13
PAX9P55771 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PAX9P55771 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms