Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 ARMC10P1-201ENST00000313754 855 ntBASIC16.91■□□□□ 0.3
NR1H2P55055 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NR1H2P55055 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 AC113347.1-201ENST00000413321 391 ntBASIC16.91■□□□□ 0.3
NR1H2P55055 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.91■□□□□ 0.3
NR1H2P55055 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NR1H2P55055 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NR1H2P55055 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.91■□□□□ 0.3
NR1H2P55055 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NR1H2P55055 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H2P55055 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NR1H2P55055 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NR1H2P55055 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 KRT8P9-201ENST00000558927 1449 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 AL390955.1-201ENST00000428694 934 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 AC004980.1-204ENST00000429707 299 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 B3GAT3P1-201ENST00000471720 806 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.9■□□□□ 0.3
NR1H2P55055 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.9■□□□□ 0.3
NR1H2P55055 KRT18P35-201ENST00000510488 1269 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.9■□□□□ 0.3
NR1H2P55055 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H2P55055 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.9■□□□□ 0.3
NR1H2P55055 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NR1H2P55055 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.9■□□□□ 0.3
NR1H2P55055 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NR1H2P55055 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H2P55055 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H2P55055 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H2P55055 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H2P55055 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H2P55055 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H2P55055 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.89■□□□□ 0.3
NR1H2P55055 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.89■□□□□ 0.29
NR1H2P55055 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NR1H2P55055 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.89■□□□□ 0.29
NR1H2P55055 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.89■□□□□ 0.29
NR1H2P55055 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.89■□□□□ 0.29
NR1H2P55055 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.89■□□□□ 0.29
NR1H2P55055 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.89■□□□□ 0.29
NR1H2P55055 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NR1H2P55055 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.89■□□□□ 0.29
NR1H2P55055 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 FER1L4-210ENST00000615531 5998 ntBASIC16.89■□□□□ 0.29
NR1H2P55055 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms