Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 TNXA-203ENST00000507684 2038 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 AL049757.1-201ENST00000616842 1596 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.52■□□□□ 0.56
EPHB3P54753 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 MED15P5-201ENST00000423150 992 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.52■□□□□ 0.56
EPHB3P54753 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.52■□□□□ 0.56
EPHB3P54753 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.52■□□□□ 0.56
EPHB3P54753 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 AL356488.2-201ENST00000602755 427 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 FAM197Y3-203ENST00000618346 717 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EPHB3P54753 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.52■□□□□ 0.56
EPHB3P54753 BX276092.7-203ENST00000637198 1536 ntBASIC18.52■□□□□ 0.56
EPHB3P54753 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
EPHB3P54753 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
EPHB3P54753 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EPHB3P54753 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 AL138781.2-201ENST00000617896 1843 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.51■□□□□ 0.55
EPHB3P54753 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.51■□□□□ 0.55
EPHB3P54753 KLF4P1-201ENST00000412782 1185 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.51■□□□□ 0.55
EPHB3P54753 DDX43P3-201ENST00000441064 443 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 UNC93B6-202ENST00000528242 690 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.51■□□□□ 0.55
EPHB3P54753 AC140113.2-201ENST00000604370 208 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.51■□□□□ 0.55
EPHB3P54753 AL589182.2-201ENST00000619332 1049 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.51■□□□□ 0.55
EPHB3P54753 PGM5P2-202ENST00000637225 1043 ntBASIC18.51■□□□□ 0.55
EPHB3P54753 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
EPHB3P54753 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.51■□□□□ 0.55
EPHB3P54753 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
EPHB3P54753 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EPHB3P54753 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 AC100803.2-201ENST00000562459 1963 ntBASIC18.5■□□□□ 0.55
EPHB3P54753 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.5■□□□□ 0.55
EPHB3P54753 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
EPHB3P54753 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EPHB3P54753 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.5■□□□□ 0.55
EPHB3P54753 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms