Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCNFP41002 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCNFP41002 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.91■□□□□ 0.46
CCNFP41002 LINC01238-205ENST00000567549 1107 ntBASIC17.91■□□□□ 0.46
CCNFP41002 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.91■□□□□ 0.46
CCNFP41002 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
CCNFP41002 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CCNFP41002 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.9■□□□□ 0.46
CCNFP41002 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.9■□□□□ 0.46
CCNFP41002 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 FAM210CP-201ENST00000445714 574 ntBASIC17.9■□□□□ 0.46
CCNFP41002 AC092647.4-201ENST00000457211 535 ntBASIC17.9■□□□□ 0.46
CCNFP41002 RASA4DP-201ENST00000460726 1199 ntBASIC17.9■□□□□ 0.46
CCNFP41002 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.9■□□□□ 0.46
CCNFP41002 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.9■□□□□ 0.46
CCNFP41002 KRT18P21-201ENST00000515767 1272 ntBASIC17.9■□□□□ 0.46
CCNFP41002 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.9■□□□□ 0.46
CCNFP41002 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 AL157888.1-201ENST00000631930 593 ntBASIC17.9■□□□□ 0.46
CCNFP41002 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
CCNFP41002 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNFP41002 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 HLA-J-201ENST00000462773 1622 ntBASIC17.9■□□□□ 0.46
CCNFP41002 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNFP41002 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCNFP41002 LINC00167-201ENST00000530583 1419 ntBASIC17.89■□□□□ 0.46
CCNFP41002 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.89■□□□□ 0.46
CCNFP41002 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCNFP41002 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
CCNFP41002 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.89■□□□□ 0.46
CCNFP41002 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
CCNFP41002 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCNFP41002 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCNFP41002 PVRIG2P-201ENST00000435460 978 ntBASIC17.89■□□□□ 0.45
CCNFP41002 AC104076.2-201ENST00000448912 469 ntBASIC17.89■□□□□ 0.45
CCNFP41002 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.89■□□□□ 0.45
CCNFP41002 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms