Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CDKN1AP38936 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.17■□□□□ 0.02
CDKN1AP38936 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 AC126763.1-201ENST00000552015 2118 ntBASIC15.17■□□□□ 0.02
CDKN1AP38936 ESPNP-201ENST00000270691 2015 ntBASIC15.17■□□□□ 0.02
CDKN1AP38936 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDKN1AP38936 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 HLA-J-201ENST00000462773 1622 ntBASIC15.17■□□□□ 0.02
CDKN1AP38936 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKN1AP38936 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN1AP38936 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKN1AP38936 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN1AP38936 AC018470.1-201ENST00000624790 3129 ntBASIC15.17■□□□□ 0.02
CDKN1AP38936 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 HTR7P1-202ENST00000624664 4411 ntBASIC15.16■□□□□ 0.02
CDKN1AP38936 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 MIR1233-2-201ENST00000408138 82 ntBASIC15.16■□□□□ 0.02
CDKN1AP38936 MIR1233-1-201ENST00000408722 82 ntBASIC15.16■□□□□ 0.02
CDKN1AP38936 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.16■□□□□ 0.02
CDKN1AP38936 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKN1AP38936 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN1AP38936 AC132938.6-201ENST00000623828 1655 ntBASIC15.16■□□□□ 0.02
CDKN1AP38936 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN1AP38936 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN1AP38936 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN1AP38936 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKN1AP38936 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 BX842568.4-201ENST00000421222 227 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 AC098831.1-202ENST00000438821 336 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN1AP38936 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN1AP38936 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKN1AP38936 AC012640.2-201ENST00000561606 901 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKN1AP38936 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKN1AP38936 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN1AP38936 NKAPP1-205ENST00000585790 367 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 AC025062.2-201ENST00000605477 670 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN1AP38936 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 AP000997.3-201ENST00000623333 2250 ntBASIC15.15■□□□□ 0.02
CDKN1AP38936 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN1AP38936 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKN1AP38936 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms