Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 EP400NL-207ENST00000454179 781 ntTSL 221.89■■□□□ 1.093e-7■■■□□ 17.6
GTF2F1P35269 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.83■□□□□ 0.293e-7■■■□□ 17.6
GTF2F1P35269 CLPX-203ENST00000558958 1493 ntTSL 1 (best)18.9■□□□□ 0.627e-13■■■□□ 17.6
GTF2F1P35269 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.027e-13■■■□□ 17.6
GTF2F1P35269 MLXIPL-210ENST00000476404 1921 ntTSL 217.57■□□□□ 0.47e-8■■■□□ 17.6
GTF2F1P35269 FAM208B-210ENST00000496681 522 ntTSL 326.38■■□□□ 1.814e-6■■■□□ 17.6
GTF2F1P35269 FAM208B-207ENST00000480839 540 ntTSL 321.51■■□□□ 1.034e-6■■■□□ 17.6
GTF2F1P35269 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.921e-8■■■□□ 17.6
GTF2F1P35269 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.614e-6■■■□□ 17.6
GTF2F1P35269 AL133352.1-201ENST00000529568 1952 ntAPPRIS ALT2 TSL 218.01■□□□□ 0.471e-8■■■□□ 17.6
GTF2F1P35269 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.99■□□□□ 0.471e-8■■■□□ 17.6
GTF2F1P35269 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.53■□□□□ 0.48e-11■■■□□ 17.6
GTF2F1P35269 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.381e-8■■■□□ 17.6
GTF2F1P35269 AL133352.1-202ENST00000527595 1423 ntAPPRIS ALT2 TSL 217.3■□□□□ 0.361e-8■■■□□ 17.6
GTF2F1P35269 NDUFB8-206ENST00000528425 608 ntTSL 417.29■□□□□ 0.361e-8■■■□□ 17.6
GTF2F1P35269 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.223e-6■■■□□ 17.6
GTF2F1P35269 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.191e-8■■■□□ 17.6
GTF2F1P35269 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.091e-8■■■□□ 17.6
GTF2F1P35269 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)14.82□□□□□ -0.041e-8■■■□□ 17.6
GTF2F1P35269 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.121e-8■■■□□ 17.6
GTF2F1P35269 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.28□□□□□ -0.281e-8■■■□□ 17.6
GTF2F1P35269 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC13.14□□□□□ -0.311e-8■■■□□ 17.6
GTF2F1P35269 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC13.03□□□□□ -0.323e-6■■■□□ 17.6
GTF2F1P35269 AL133352.1-205ENST00000533549 582 ntAPPRIS ALT2 TSL 412.99□□□□□ -0.331e-8■■■□□ 17.6
GTF2F1P35269 MBTD1-202ENST00000405860 3224 ntTSL 512.47□□□□□ -0.411e-8■■■□□ 17.6
GTF2F1P35269 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC11.9□□□□□ -0.53e-6■■■□□ 17.6
GTF2F1P35269 NDUFB8-204ENST00000464651 390 ntTSL 211.27□□□□□ -0.611e-8■■■□□ 17.6
GTF2F1P35269 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.611e-8■■■□□ 17.6
GTF2F1P35269 AL133352.1-204ENST00000528174 538 ntAPPRIS ALT2 TSL 310.33□□□□□ -0.761e-8■■■□□ 17.6
GTF2F1P35269 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)9.73□□□□□ -0.851e-8■■■□□ 17.6
GTF2F1P35269 SOX5-209ENST00000536911 855 ntTSL 39.62□□□□□ -0.871e-8■■■□□ 17.6
GTF2F1P35269 SOX5-207ENST00000536629 570 ntTSL 49.37□□□□□ -0.911e-8■■■□□ 17.6
GTF2F1P35269 SOX5-206ENST00000535530 576 ntTSL 49.34□□□□□ -0.911e-8■■■□□ 17.6
GTF2F1P35269 MBTD1-206ENST00000591270 2163 ntTSL 26.82□□□□□ -1.321e-8■■■□□ 17.6
GTF2F1P35269 IMMP2L-209ENST00000489381 856 ntTSL 56.67□□□□□ -1.341e-8■■■□□ 17.6
GTF2F1P35269 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.7□□□□□ -1.51e-8■■■□□ 17.6
GTF2F1P35269 ARHGEF2-220ENST00000609707 692 ntTSL 211.65□□□□□ -0.545e-7■■■□□ 17.6
GTF2F1P35269 SH3BP5-204ENST00000412806 1900 ntTSL 523.67■■□□□ 1.387e-13■■■□□ 17.6
GTF2F1P35269 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.777e-13■■■□□ 17.6
GTF2F1P35269 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.46□□□□□ -0.91e-8■■■□□ 17.6
GTF2F1P35269 BCOR-207ENST00000412952 288 ntTSL 514.02□□□□□ -0.171e-6■■■□□ 17.6
GTF2F1P35269 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.311e-6■■■□□ 17.6
GTF2F1P35269 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.561e-6■■■□□ 17.6
GTF2F1P35269 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.581e-6■■■□□ 17.6
GTF2F1P35269 BCOR-206ENST00000406200 4216 ntTSL 210.57□□□□□ -0.721e-6■■■□□ 17.6
GTF2F1P35269 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.81e-6■■■□□ 17.6
GTF2F1P35269 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.29■□□□□ 0.042e-8■■■□□ 17.5
GTF2F1P35269 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.29■□□□□ 0.042e-8■■■□□ 17.5
GTF2F1P35269 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.29■□□□□ 0.042e-8■■■□□ 17.5
GTF2F1P35269 PPIA-202ENST00000415933 863 ntTSL 211.15□□□□□ -0.622e-8■■■□□ 17.5
GTF2F1P35269 PPIA-205ENST00000479021 552 ntTSL 411□□□□□ -0.652e-8■■■□□ 17.5
GTF2F1P35269 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.962e-8■■■□□ 17.5
GTF2F1P35269 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.31□□□□□ -1.082e-8■■■□□ 17.5
GTF2F1P35269 PPIA-207ENST00000481437 570 ntTSL 28.31□□□□□ -1.082e-8■■■□□ 17.5
GTF2F1P35269 GAK-212ENST00000510022 618 ntTSL 410.96□□□□□ -0.652e-6■■■□□ 17.5
GTF2F1P35269 GAK-215ENST00000511229 568 ntTSL 37.31□□□□□ -1.242e-6■■■□□ 17.5
GTF2F1P35269 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.88■■□□□ 1.092e-6■■■□□ 17.5
GTF2F1P35269 ZNF385A-208ENST00000549962 572 ntTSL 419.54■□□□□ 0.722e-6■■■□□ 17.5
GTF2F1P35269 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.552e-6■■■□□ 17.5
GTF2F1P35269 ZNF385A-210ENST00000550774 545 ntTSL 416.97■□□□□ 0.312e-6■■■□□ 17.5
GTF2F1P35269 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.23■■■□□ 2.753e-9■■■□□ 17.5
GTF2F1P35269 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.313e-9■■■□□ 17.5
GTF2F1P35269 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.99■■□□□ 1.273e-9■■■□□ 17.5
GTF2F1P35269 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.24■■□□□ 1.955e-6■■■□□ 17.5
GTF2F1P35269 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.91■■□□□ 1.95e-6■■■□□ 17.5
GTF2F1P35269 TBX2-AS1-204ENST00000591313 640 ntTSL 221.03■□□□□ 0.965e-6■■■□□ 17.5
GTF2F1P35269 TCF20-204ENST00000515426 633 ntTSL 519.26■□□□□ 0.675e-6■■■□□ 17.5
GTF2F1P35269 TBX2-AS1-205ENST00000592009 330 ntTSL 318.83■□□□□ 0.65e-6■■■□□ 17.5
GTF2F1P35269 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC13.08□□□□□ -0.325e-6■■■□□ 17.5
GTF2F1P35269 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.943e-6■■■□□ 17.5
GTF2F1P35269 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.823e-6■■■□□ 17.5
GTF2F1P35269 ING5-204ENST00000445620 662 ntTSL 37.32□□□□□ -1.243e-6■■■□□ 17.5
GTF2F1P35269 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-8■■■□□ 17.4
GTF2F1P35269 GRB10-221ENST00000483819 657 ntTSL 224.39■■□□□ 1.496e-7■■■□□ 17.4
GTF2F1P35269 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.94■□□□□ 0.946e-7■■■□□ 17.4
GTF2F1P35269 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.19■□□□□ 0.344e-60■■■□□ 17.4
GTF2F1P35269 RRBP1-209ENST00000495501 832 ntTSL 522.43■■□□□ 1.189e-7■■■□□ 17.4
GTF2F1P35269 SLC35C2-209ENST00000484188 854 ntTSL 524.69■■□□□ 1.542e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.532e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.66■□□□□ 0.422e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-208ENST00000481809 872 ntTSL 516.98■□□□□ 0.312e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.32e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-210ENST00000484318 971 ntTSL 516.7■□□□□ 0.262e-8■■■□□ 17.4
GTF2F1P35269 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.5■□□□□ 0.072e-8■■■□□ 17.4
GTF2F1P35269 ZEB2-219ENST00000475115 536 ntTSL 59.48□□□□□ -0.894e-17■■■□□ 17.4
GTF2F1P35269 TMCC1-212ENST00000512902 533 ntTSL 318.27■□□□□ 0.522e-14■■■□□ 17.4
GTF2F1P35269 TMCC1-214ENST00000515024 557 ntTSL 318■□□□□ 0.472e-14■■■□□ 17.4
GTF2F1P35269 TMCC1-205ENST00000505616 402 ntTSL 211.34□□□□□ -0.592e-14■■■□□ 17.4
GTF2F1P35269 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.58□□□□□ -0.882e-14■■■□□ 17.4
GTF2F1P35269 TMCC1-206ENST00000505924 665 ntTSL 56.63□□□□□ -1.352e-14■■■□□ 17.4
GTF2F1P35269 TMCC1-208ENST00000508869 467 ntTSL 35.94□□□□□ -1.462e-14■■■□□ 17.4
GTF2F1P35269 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC14.62□□□□□ -0.074e-7■■■□□ 17.4
GTF2F1P35269 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC13.43□□□□□ -0.264e-7■■■□□ 17.4
GTF2F1P35269 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.34e-7■■■□□ 17.4
GTF2F1P35269 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.664e-7■■■□□ 17.4
GTF2F1P35269 PBX2-202ENST00000478678 1320 ntTSL 1 (best)24.91■■□□□ 1.583e-12■■■□□ 17.4
GTF2F1P35269 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.772e-11■■■□□ 17.4
GTF2F1P35269 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.52■■■□□ 2.642e-11■■■□□ 17.4
GTF2F1P35269 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.522e-11■■■□□ 17.4
GTF2F1P35269 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.37■■■□□ 2.292e-11■■■□□ 17.4
Retrieved 100 of 18,214 protein–RNA pairs in 167.1 ms