Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.29■□□□□ 0.36
LAMA1P25391 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LAMA1P25391 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA1P25391 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA1P25391 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA1P25391 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.29■□□□□ 0.36
LAMA1P25391 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.28■□□□□ 0.36
LAMA1P25391 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.28■□□□□ 0.36
LAMA1P25391 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
LAMA1P25391 AL035252.4-201ENST00000624174 288 ntBASIC17.28■□□□□ 0.36
LAMA1P25391 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA1P25391 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
LAMA1P25391 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA1P25391 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LAMA1P25391 AC087289.5-201ENST00000586076 3175 ntBASIC17.28■□□□□ 0.36
LAMA1P25391 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA1P25391 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LAMA1P25391 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA1P25391 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
LAMA1P25391 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA1P25391 AC002472.2-201ENST00000442739 958 ntBASIC17.27■□□□□ 0.36
LAMA1P25391 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMA1P25391 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMA1P25391 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LAMA1P25391 AL096828.2-201ENST00000567259 1965 ntBASIC17.27■□□□□ 0.36
LAMA1P25391 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA1P25391 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA1P25391 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LAMA1P25391 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.27■□□□□ 0.36
LAMA1P25391 GAPDHP21-201ENST00000450301 1010 ntBASIC17.27■□□□□ 0.36
LAMA1P25391 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.27■□□□□ 0.36
LAMA1P25391 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LAMA1P25391 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
LAMA1P25391 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LAMA1P25391 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMA1P25391 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMA1P25391 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMA1P25391 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
LAMA1P25391 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA1P25391 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA1P25391 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA1P25391 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA1P25391 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LAMA1P25391 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.27■□□□□ 0.35
LAMA1P25391 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.27■□□□□ 0.35
LAMA1P25391 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.26■□□□□ 0.35
LAMA1P25391 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.26■□□□□ 0.35
LAMA1P25391 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMA1P25391 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
LAMA1P25391 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMA1P25391 CROCCP3-202ENST00000420820 1947 ntBASIC17.26■□□□□ 0.35
LAMA1P25391 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LAMA1P25391 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMA1P25391 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMA1P25391 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.26■□□□□ 0.35
LAMA1P25391 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.26■□□□□ 0.35
LAMA1P25391 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LAMA1P25391 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMA1P25391 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.25■□□□□ 0.35
LAMA1P25391 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
LAMA1P25391 AL513210.1-201ENST00000629608 234 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms