Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 IGHV3-41-201ENST00000613121 348 ntBASIC17.98■□□□□ 0.47
HLA-DPA1P20036 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 IER3-202ENST00000376377 1350 ntBASIC17.98■□□□□ 0.47
HLA-DPA1P20036 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPA1P20036 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 CHCHD2P8-201ENST00000429873 447 ntBASIC17.97■□□□□ 0.47
HLA-DPA1P20036 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AL353801.3-201ENST00000609898 542 ntBASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AC124864.1-201ENST00000623408 392 ntBASIC17.97■□□□□ 0.47
HLA-DPA1P20036 AP000550.4-202ENST00000639755 178 ntBASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPA1P20036 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPA1P20036 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AC016734.2-201ENST00000624325 1377 ntBASIC17.95■□□□□ 0.46
HLA-DPA1P20036 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms