Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKB1P19838 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NFKB1P19838 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKB1P19838 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKB1P19838 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKB1P19838 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKB1P19838 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKB1P19838 GUSBP12-201ENST00000513727 720 ntBASIC18.1■□□□□ 0.49
NFKB1P19838 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKB1P19838 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKB1P19838 AC087388.1-201ENST00000571370 1112 ntBASIC18.1■□□□□ 0.49
NFKB1P19838 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKB1P19838 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 AL592071.1-201ENST00000611956 408 ntBASIC18.1■□□□□ 0.49
NFKB1P19838 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKB1P19838 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 AC133963.1-201ENST00000504166 1679 ntBASIC18.09■□□□□ 0.49
NFKB1P19838 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NFKB1P19838 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 PP12613-201ENST00000424958 2230 ntBASIC18.09■□□□□ 0.49
NFKB1P19838 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.09■□□□□ 0.49
NFKB1P19838 RN7SL606P-201ENST00000472779 293 ntBASIC18.09■□□□□ 0.49
NFKB1P19838 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.09■□□□□ 0.49
NFKB1P19838 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NFKB1P19838 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.09■□□□□ 0.49
NFKB1P19838 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.09■□□□□ 0.49
NFKB1P19838 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
NFKB1P19838 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.09■□□□□ 0.49
NFKB1P19838 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NFKB1P19838 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NFKB1P19838 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKB1P19838 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NFKB1P19838 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NFKB1P19838 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.08■□□□□ 0.49
NFKB1P19838 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.08■□□□□ 0.49
NFKB1P19838 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NFKB1P19838 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NFKB1P19838 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
NFKB1P19838 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.08■□□□□ 0.49
NFKB1P19838 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.08■□□□□ 0.49
NFKB1P19838 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
NFKB1P19838 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
NFKB1P19838 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.08■□□□□ 0.48
NFKB1P19838 KRT8P26-201ENST00000534154 1276 ntBASIC18.08■□□□□ 0.48
NFKB1P19838 AC124864.1-201ENST00000623408 392 ntBASIC18.08■□□□□ 0.48
NFKB1P19838 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NFKB1P19838 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
NFKB1P19838 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
NFKB1P19838 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
NFKB1P19838 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NFKB1P19838 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.07■□□□□ 0.48
NFKB1P19838 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms