Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
VCLP18206 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 TSPY22P-201ENST00000427496 604 ntBASIC17.91■□□□□ 0.46
VCLP18206 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 KRT8P26-201ENST00000534154 1276 ntBASIC17.91■□□□□ 0.46
VCLP18206 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 AC005332.3-201ENST00000589904 676 ntBASIC17.91■□□□□ 0.46
VCLP18206 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VCLP18206 REXO1L9P-201ENST00000604264 2108 ntBASIC17.91■□□□□ 0.46
VCLP18206 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
VCLP18206 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.91■□□□□ 0.46
VCLP18206 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 Z83836.1-201ENST00000624605 1642 ntBASIC17.9■□□□□ 0.46
VCLP18206 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCLP18206 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCLP18206 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 IGHGP-201ENST00000390555 1178 ntBASIC17.9■□□□□ 0.46
VCLP18206 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 AC113404.2-201ENST00000507884 177 ntBASIC17.9■□□□□ 0.46
VCLP18206 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.9■□□□□ 0.46
VCLP18206 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VCLP18206 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VCLP18206 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCLP18206 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCLP18206 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCLP18206 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.89■□□□□ 0.46
VCLP18206 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
VCLP18206 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.89■□□□□ 0.46
VCLP18206 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
VCLP18206 PHGDH-209ENST00000641074 1780 ntBASIC17.89■□□□□ 0.45
VCLP18206 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.89■□□□□ 0.45
VCLP18206 AC080080.1-201ENST00000625121 2420 ntBASIC17.89■□□□□ 0.45
VCLP18206 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VCLP18206 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.89■□□□□ 0.45
VCLP18206 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VCLP18206 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.89■□□□□ 0.45
VCLP18206 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.89■□□□□ 0.45
VCLP18206 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.89■□□□□ 0.45
VCLP18206 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.89■□□□□ 0.45
VCLP18206 AC093458.2-201ENST00000623150 629 ntBASIC17.89■□□□□ 0.45
VCLP18206 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 AC012317.2-201ENST00000623305 2251 ntBASIC17.89■□□□□ 0.45
VCLP18206 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
VCLP18206 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VCLP18206 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.89■□□□□ 0.45
VCLP18206 AL096828.2-201ENST00000567259 1965 ntBASIC17.89■□□□□ 0.45
VCLP18206 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCLP18206 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCLP18206 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms