Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.82□□□□□ -0.04
IGHV3-43DP0DP04 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 AL355312.1-201ENST00000407115 2176 ntBASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 KRT18P48-201ENST00000434763 852 ntBASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 KRT18P38-201ENST00000449496 1282 ntBASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGHV3-43DP0DP04 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 STARP1-201ENST00000397973 869 ntBASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AK4P3-201ENST00000418260 669 ntBASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AC004263.2-201ENST00000617183 678 ntBASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AC006011.2-201ENST00000621313 1158 ntBASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AC012313.1-201ENST00000593393 3059 ntBASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGHV3-43DP0DP04 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms