Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 AC116562.2-201ENST00000507042 360 ntBASIC19.22■□□□□ 0.67
CCDC175P0C221 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC175P0C221 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC175P0C221 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC175P0C221 AC006058.3-201ENST00000606217 1069 ntBASIC19.22■□□□□ 0.67
CCDC175P0C221 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 CR769767.2-201ENST00000622735 460 ntBASIC19.22■□□□□ 0.67
CCDC175P0C221 AC112497.1-201ENST00000624824 639 ntBASIC19.22■□□□□ 0.67
CCDC175P0C221 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC175P0C221 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC175P0C221 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 PCDHA14-201ENST00000506751 2298 ntBASIC19.22■□□□□ 0.67
CCDC175P0C221 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC175P0C221 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC175P0C221 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
CCDC175P0C221 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC175P0C221 AC009949.1-201ENST00000623048 1830 ntBASIC19.21■□□□□ 0.67
CCDC175P0C221 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC175P0C221 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC175P0C221 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.21■□□□□ 0.67
CCDC175P0C221 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC175P0C221 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC175P0C221 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC175P0C221 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC175P0C221 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC175P0C221 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC175P0C221 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CCDC175P0C221 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC175P0C221 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
CCDC175P0C221 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC175P0C221 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC175P0C221 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC175P0C221 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC175P0C221 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CCDC175P0C221 CD177P1-201ENST00000606252 935 ntBASIC19.2■□□□□ 0.66
CCDC175P0C221 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC175P0C221 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 FER1L4-210ENST00000615531 5998 ntBASIC19.2■□□□□ 0.66
CCDC175P0C221 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC175P0C221 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CCDC175P0C221 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC175P0C221 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms